Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 AC243562.2-201ENST00000561247 970 ntBASIC14.01□□□□□ -0.17
CDH20Q9HBT6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 AC007967.4-201ENST00000614700 386 ntBASIC14.01□□□□□ -0.17
CDH20Q9HBT6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 PCDHA3-202ENST00000532566 4594 ntBASIC14.01□□□□□ -0.17
CDH20Q9HBT6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
CDH20Q9HBT6 AC008677.1-201ENST00000519230 1561 ntBASIC14□□□□□ -0.17
CDH20Q9HBT6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14□□□□□ -0.17
CDH20Q9HBT6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14□□□□□ -0.17
CDH20Q9HBT6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CDH20Q9HBT6 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14□□□□□ -0.17
CDH20Q9HBT6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CDH20Q9HBT6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 TUBB3P1-201ENST00000405796 1332 ntBASIC14□□□□□ -0.17
CDH20Q9HBT6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14□□□□□ -0.17
CDH20Q9HBT6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14□□□□□ -0.17
CDH20Q9HBT6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14□□□□□ -0.17
CDH20Q9HBT6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14□□□□□ -0.17
CDH20Q9HBT6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14□□□□□ -0.17
CDH20Q9HBT6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14□□□□□ -0.17
CDH20Q9HBT6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14□□□□□ -0.17
CDH20Q9HBT6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14□□□□□ -0.17
CDH20Q9HBT6 AC105021.1-202ENST00000570572 669 ntBASIC14□□□□□ -0.17
CDH20Q9HBT6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CDH20Q9HBT6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CDH20Q9HBT6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CDH20Q9HBT6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14□□□□□ -0.17
CDH20Q9HBT6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 GRAMD4P3-201ENST00000621665 1669 ntBASIC14□□□□□ -0.17
CDH20Q9HBT6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14□□□□□ -0.17
CDH20Q9HBT6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CDH20Q9HBT6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14□□□□□ -0.17
CDH20Q9HBT6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14□□□□□ -0.17
CDH20Q9HBT6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14□□□□□ -0.17
CDH20Q9HBT6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH20Q9HBT6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms