Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 ACTG1P3-201ENST00000431775 1114 ntBASIC18.56■□□□□ 0.56
EFCC1Q9HA90 RNA5SP423-201ENST00000517127 109 ntBASIC18.56■□□□□ 0.56
EFCC1Q9HA90 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 AP002490.2-201ENST00000524791 560 ntBASIC18.56■□□□□ 0.56
EFCC1Q9HA90 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 MIR5189-201ENST00000577370 114 ntBASIC18.56■□□□□ 0.56
EFCC1Q9HA90 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
EFCC1Q9HA90 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 BCRP2-202ENST00000447763 634 ntBASIC18.55■□□□□ 0.56
EFCC1Q9HA90 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 BCRP6-201ENST00000510112 632 ntBASIC18.55■□□□□ 0.56
EFCC1Q9HA90 BCRP7-201ENST00000511549 544 ntBASIC18.55■□□□□ 0.56
EFCC1Q9HA90 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 CU634019.7-201ENST00000624153 1185 ntBASIC18.55■□□□□ 0.56
EFCC1Q9HA90 FP236241.2-201ENST00000624906 1185 ntBASIC18.55■□□□□ 0.56
EFCC1Q9HA90 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.55■□□□□ 0.56
EFCC1Q9HA90 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 RN7SL399P-201ENST00000471648 279 ntBASIC18.54■□□□□ 0.56
EFCC1Q9HA90 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 AC133539.2-201ENST00000604757 467 ntBASIC18.54■□□□□ 0.56
EFCC1Q9HA90 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.54■□□□□ 0.56
EFCC1Q9HA90 AC060834.1-201ENST00000443027 2032 ntBASIC18.54■□□□□ 0.56
EFCC1Q9HA90 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms