Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 AL353705.2-201ENST00000428243 662 ntBASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 EEF1DP4-201ENST00000446006 880 ntBASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
LRRC40Q9H9A6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
LRRC40Q9H9A6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.21■□□□□ 0.18
LRRC40Q9H9A6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC40Q9H9A6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC40Q9H9A6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.21■□□□□ 0.18
LRRC40Q9H9A6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
LRRC40Q9H9A6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.21■□□□□ 0.18
LRRC40Q9H9A6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 PPT1-215ENST00000641471 2368 ntBASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 RPSAP43-201ENST00000402237 625 ntBASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 UPF3AP3-201ENST00000420996 769 ntBASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 AC112482.1-201ENST00000492080 688 ntBASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 AC004835.2-201ENST00000603762 682 ntBASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 AC013268.4-201ENST00000637413 2228 ntBASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 AC067930.6-201ENST00000623257 4947 ntBASIC16.2■□□□□ 0.18
LRRC40Q9H9A6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 TMBIM7P-203ENST00000641617 1718 ntBASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 AC018892.3-201ENST00000623986 2499 ntBASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms