Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 HILS1-202ENST00000545329 423 ntBASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RPAP1Q9BWH6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 AL691432.1-201ENST00000596308 1422 ntBASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 AP001282.1-201ENST00000531301 1499 ntBASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 MEP1AP4-201ENST00000423244 1087 ntBASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 HLA-V-201ENST00000429037 534 ntBASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 AC243562.2-201ENST00000561247 970 ntBASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 AL162274.1-201ENST00000617191 1098 ntBASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 AC004461.2-201ENST00000629517 803 ntBASIC19.27■□□□□ 0.68
RPAP1Q9BWH6 AC126177.1-201ENST00000547829 2218 ntBASIC19.27■□□□□ 0.67
RPAP1Q9BWH6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RPAP1Q9BWH6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 AC004987.2-201ENST00000395959 1148 ntBASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 RN7SL752P-201ENST00000463779 287 ntBASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 AC011495.1-201ENST00000498085 584 ntBASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.26■□□□□ 0.67
RPAP1Q9BWH6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 CYP4F24P-201ENST00000586049 1580 ntBASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 TPRX2P-201ENST00000535362 881 ntBASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.25■□□□□ 0.67
RPAP1Q9BWH6 MIR6069-201ENST00000620069 79 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms