Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 AL136379.1-201ENST00000623471 2642 ntBASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 AL109954.1-202ENST00000564051 2148 ntBASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 AC099063.4-201ENST00000641099 1602 ntBASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 AL590627.1-203ENST00000421194 1026 ntBASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 RPL13AP23-201ENST00000480739 586 ntBASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 AC011477.6-201ENST00000604980 1927 ntBASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 IL9RP2-201ENST00000423948 1312 ntBASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 AC104109.2-201ENST00000602919 1418 ntBASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD3Q9BV44 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 AL365330.1-201ENST00000607459 531 ntBASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 AC138035.3-201ENST00000622706 2791 ntBASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.31■□□□□ 0.04
THUMPD3Q9BV44 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms