Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTBDNQ9BSG5 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RTBDNQ9BSG5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 AC068587.6-202ENST00000641839 5619 ntBASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 MRPL20P1-201ENST00000400819 433 ntBASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 KRT18P31-201ENST00000506277 1292 ntBASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 AL031432.2-201ENST00000566714 459 ntBASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 AC002347.1-201ENST00000569543 541 ntBASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 AL928711.1-201ENST00000570165 459 ntBASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
RTBDNQ9BSG5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 KRT18P34-201ENST00000488218 1270 ntBASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 AL645728.2-201ENST00000641974 660 ntBASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTBDNQ9BSG5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms