Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
NR1H4Q96RI1 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
NR1H4Q96RI1 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NR1H4Q96RI1 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NR1H4Q96RI1 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
NR1H4Q96RI1 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.08■□□□□ 0.01
NR1H4Q96RI1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NR1H4Q96RI1 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
NR1H4Q96RI1 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
NR1H4Q96RI1 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.08■□□□□ 0
NR1H4Q96RI1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.08■□□□□ 0
NR1H4Q96RI1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
NR1H4Q96RI1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.08■□□□□ 0
NR1H4Q96RI1 AC092597.1-201ENST00000487352 616 ntBASIC15.08■□□□□ 0
NR1H4Q96RI1 ZNF444P1-201ENST00000559497 298 ntBASIC15.08■□□□□ 0
NR1H4Q96RI1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.08■□□□□ 0
NR1H4Q96RI1 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.08■□□□□ 0
NR1H4Q96RI1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.08■□□□□ 0
NR1H4Q96RI1 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.08■□□□□ 0
NR1H4Q96RI1 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.08■□□□□ 0
NR1H4Q96RI1 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.08■□□□□ 0
NR1H4Q96RI1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.08■□□□□ 0
NR1H4Q96RI1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.08■□□□□ 0
NR1H4Q96RI1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.08■□□□□ 0
NR1H4Q96RI1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
NR1H4Q96RI1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.08■□□□□ 0
NR1H4Q96RI1 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NR1H4Q96RI1 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.08■□□□□ 0
NR1H4Q96RI1 ZBED1P1-201ENST00000502364 1930 ntBASIC15.07■□□□□ 0
NR1H4Q96RI1 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NR1H4Q96RI1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.07■□□□□ 0
NR1H4Q96RI1 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.07■□□□□ 0
NR1H4Q96RI1 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NR1H4Q96RI1 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.07■□□□□ 0
NR1H4Q96RI1 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.07■□□□□ 0
NR1H4Q96RI1 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 COL6A4P2-202ENST00000504443 2753 ntBASIC15.07■□□□□ 0
NR1H4Q96RI1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NR1H4Q96RI1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.07■□□□□ 0
NR1H4Q96RI1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.07■□□□□ 0
NR1H4Q96RI1 SPDYE15P-201ENST00000424157 909 ntBASIC15.07■□□□□ 0
NR1H4Q96RI1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.07■□□□□ 0
NR1H4Q96RI1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NR1H4Q96RI1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.07■□□□□ 0
NR1H4Q96RI1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.07■□□□□ 0
NR1H4Q96RI1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.07■□□□□ 0
NR1H4Q96RI1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.07■□□□□ 0
NR1H4Q96RI1 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.07■□□□□ 0
NR1H4Q96RI1 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.07■□□□□ 0
NR1H4Q96RI1 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.07■□□□□ 0
NR1H4Q96RI1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 AC099521.3-201ENST00000624251 2938 ntBASIC15.07■□□□□ 0
NR1H4Q96RI1 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.07■□□□□ 0
NR1H4Q96RI1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.07■□□□□ 0
NR1H4Q96RI1 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.07■□□□□ 0
NR1H4Q96RI1 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NR1H4Q96RI1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.07■□□□□ 0
NR1H4Q96RI1 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
NR1H4Q96RI1 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR1H4Q96RI1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.06■□□□□ 0
NR1H4Q96RI1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms