Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC022210.1-201ENST00000449856 793 ntBASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 AC007389.4-201ENST00000454674 793 ntBASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 AL359711.2-201ENST00000563105 872 ntBASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 MIR6752-201ENST00000618442 71 ntBASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85AQ96PX6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 AC097359.3-201ENST00000603982 1210 ntBASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85AQ96PX6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms