Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC11.91□□□□□ -0.5
RNF183Q96D59 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.91□□□□□ -0.5
RNF183Q96D59 AL009178.2-201ENST00000597278 2719 ntBASIC11.91□□□□□ -0.5
RNF183Q96D59 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
RNF183Q96D59 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.91□□□□□ -0.5
RNF183Q96D59 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.91□□□□□ -0.5
RNF183Q96D59 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 AC093724.1-201ENST00000448659 1027 ntBASIC11.91□□□□□ -0.5
RNF183Q96D59 AL512638.1-201ENST00000457493 794 ntBASIC11.91□□□□□ -0.5
RNF183Q96D59 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.91□□□□□ -0.5
RNF183Q96D59 AC097493.3-201ENST00000509725 367 ntBASIC11.91□□□□□ -0.5
RNF183Q96D59 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 RNA5SP410-201ENST00000516285 106 ntBASIC11.91□□□□□ -0.5
RNF183Q96D59 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.91□□□□□ -0.5
RNF183Q96D59 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.91□□□□□ -0.5
RNF183Q96D59 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.91□□□□□ -0.5
RNF183Q96D59 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.91□□□□□ -0.5
RNF183Q96D59 AC024267.1-201ENST00000582320 895 ntBASIC11.91□□□□□ -0.5
RNF183Q96D59 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.91□□□□□ -0.5
RNF183Q96D59 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.91□□□□□ -0.5
RNF183Q96D59 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
RNF183Q96D59 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
RNF183Q96D59 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RNF183Q96D59 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF183Q96D59 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.91□□□□□ -0.5
RNF183Q96D59 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RNF183Q96D59 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
RNF183Q96D59 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
RNF183Q96D59 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.9□□□□□ -0.5
RNF183Q96D59 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF183Q96D59 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.9□□□□□ -0.5
RNF183Q96D59 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.9□□□□□ -0.5
RNF183Q96D59 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RNF183Q96D59 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF183Q96D59 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC11.9□□□□□ -0.5
RNF183Q96D59 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF183Q96D59 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF183Q96D59 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF183Q96D59 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.9□□□□□ -0.5
RNF183Q96D59 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF183Q96D59 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms