Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 AC009090.5-201ENST00000624886 2285 ntBASIC15.38■□□□□ 0.05
VPS33AQ96AX1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 AL589702.1-201ENST00000641229 1509 ntBASIC15.38■□□□□ 0.05
VPS33AQ96AX1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 AC079781.3-201ENST00000449110 356 ntBASIC15.38■□□□□ 0.05
VPS33AQ96AX1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 AC109635.5-201ENST00000533593 962 ntBASIC15.38■□□□□ 0.05
VPS33AQ96AX1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 AL691432.3-201ENST00000621860 400 ntBASIC15.38■□□□□ 0.05
VPS33AQ96AX1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VPS33AQ96AX1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 OR2I1P-210ENST00000642037 4691 ntBASIC15.37■□□□□ 0.05
VPS33AQ96AX1 MYO15B-237ENST00000642007 4893 ntBASIC15.37■□□□□ 0.05
VPS33AQ96AX1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 MIR7706-201ENST00000613747 67 ntBASIC15.37■□□□□ 0.05
VPS33AQ96AX1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms