Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 AL513477.1-201ENST00000602865 2407 ntBASIC16.85■□□□□ 0.29
ATP2A3Q93084 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 AP005018.1-201ENST00000525475 301 ntBASIC16.85■□□□□ 0.29
ATP2A3Q93084 AL133215.2-201ENST00000609242 977 ntBASIC16.85■□□□□ 0.29
ATP2A3Q93084 AL844908.2-201ENST00000609461 460 ntBASIC16.85■□□□□ 0.29
ATP2A3Q93084 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 AC025048.6-201ENST00000634326 1161 ntBASIC16.85■□□□□ 0.29
ATP2A3Q93084 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP2A3Q93084 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 AC007950.2-201ENST00000615045 2347 ntBASIC16.84■□□□□ 0.29
ATP2A3Q93084 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 AL080243.2-201ENST00000418783 582 ntBASIC16.84■□□□□ 0.29
ATP2A3Q93084 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.84■□□□□ 0.29
ATP2A3Q93084 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 AC009407.1-201ENST00000568958 598 ntBASIC16.84■□□□□ 0.29
ATP2A3Q93084 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 AC026979.3-201ENST00000607315 403 ntBASIC16.84■□□□□ 0.29
ATP2A3Q93084 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP2A3Q93084 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 GPAA1P2-202ENST00000606848 1787 ntBASIC16.84■□□□□ 0.29
ATP2A3Q93084 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
ATP2A3Q93084 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A3Q93084 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A3Q93084 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A3Q93084 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A3Q93084 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A3Q93084 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A3Q93084 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
ATP2A3Q93084 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A3Q93084 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A3Q93084 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP2A3Q93084 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms