Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SEMA4DQ92854 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA4DQ92854 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.1■□□□□ 0.33
SEMA4DQ92854 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SEMA4DQ92854 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.1■□□□□ 0.33
SEMA4DQ92854 AC067863.1-201ENST00000494933 530 ntBASIC17.1■□□□□ 0.33
SEMA4DQ92854 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.1■□□□□ 0.33
SEMA4DQ92854 AC027369.6-201ENST00000525520 931 ntBASIC17.1■□□□□ 0.33
SEMA4DQ92854 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 AL390955.2-201ENST00000603032 514 ntBASIC17.1■□□□□ 0.33
SEMA4DQ92854 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA4DQ92854 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA4DQ92854 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA4DQ92854 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SEMA4DQ92854 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA4DQ92854 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 MIR943-201ENST00000401286 94 ntBASIC17.09■□□□□ 0.33
SEMA4DQ92854 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 AC010336.2-201ENST00000564226 506 ntBASIC17.09■□□□□ 0.33
SEMA4DQ92854 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 AC106028.4-201ENST00000614509 607 ntBASIC17.09■□□□□ 0.33
SEMA4DQ92854 AC093512.1-201ENST00000617969 520 ntBASIC17.09■□□□□ 0.33
SEMA4DQ92854 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 AC090616.6-203ENST00000579186 1945 ntBASIC17.09■□□□□ 0.33
SEMA4DQ92854 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 SSR4P1-203ENST00000599569 2260 ntBASIC17.09■□□□□ 0.33
SEMA4DQ92854 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SEMA4DQ92854 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA4DQ92854 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA4DQ92854 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.08■□□□□ 0.33
SEMA4DQ92854 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA4DQ92854 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SEMA4DQ92854 AC092384.3-202ENST00000564646 2873 ntBASIC17.08■□□□□ 0.33
SEMA4DQ92854 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.08■□□□□ 0.33
SEMA4DQ92854 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA4DQ92854 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA4DQ92854 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA4DQ92854 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA4DQ92854 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.08■□□□□ 0.33
SEMA4DQ92854 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SEMA4DQ92854 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA4DQ92854 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms