Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 AL138918.1-201ENST00000568306 659 ntBASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 AC024267.1-201ENST00000582320 895 ntBASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 NORAD-201ENST00000565493 5339 ntBASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC44A1Q8WWI5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 AL009178.2-201ENST00000597278 2719 ntBASIC16■□□□□ 0.15
SLC44A1Q8WWI5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC44A1Q8WWI5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 AC004987.2-201ENST00000395959 1148 ntBASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 AC093909.1-201ENST00000504731 1122 ntBASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 AC018845.2-201ENST00000568326 409 ntBASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 Z83851.2-201ENST00000609564 659 ntBASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 SPTSSB-204ENST00000617024 1292 ntBASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC44A1Q8WWI5 AC007292.2-201ENST00000593524 1812 ntBASIC15.98■□□□□ 0.15
SLC44A1Q8WWI5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms