Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 PRYP6-201ENST00000514804 343 ntBASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 AC073389.1-201ENST00000595595 795 ntBASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 AL390955.2-201ENST00000603032 514 ntBASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 TREML5P-201ENST00000421694 576 ntBASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 AL138918.1-201ENST00000568306 659 ntBASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 AL390754.1-201ENST00000619088 582 ntBASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 FO538757.1-201ENST00000623083 1397 ntBASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSMEM1Q8WWF3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSMEM1Q8WWF3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSMEM1Q8WWF3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSMEM1Q8WWF3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
SSMEM1Q8WWF3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SSMEM1Q8WWF3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSMEM1Q8WWF3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSMEM1Q8WWF3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSMEM1Q8WWF3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSMEM1Q8WWF3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSMEM1Q8WWF3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.28□□□□□ -0.28
SSMEM1Q8WWF3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSMEM1Q8WWF3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms