Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 AP003680.1-201ENST00000598970 3660 ntBASIC15.92■□□□□ 0.14
CHD5Q8TDI0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.92■□□□□ 0.14
CHD5Q8TDI0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 AC132938.2-201ENST00000579188 680 ntBASIC15.91■□□□□ 0.14
CHD5Q8TDI0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 AL591163.1-201ENST00000641757 987 ntBASIC15.91■□□□□ 0.14
CHD5Q8TDI0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 RPL5P21-201ENST00000404620 815 ntBASIC15.91■□□□□ 0.14
CHD5Q8TDI0 COX5BP8-201ENST00000416911 349 ntBASIC15.91■□□□□ 0.14
CHD5Q8TDI0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 FAM86LP-201ENST00000478302 853 ntBASIC15.91■□□□□ 0.14
CHD5Q8TDI0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 AC120045.2-201ENST00000567334 178 ntBASIC15.91■□□□□ 0.14
CHD5Q8TDI0 WFDC1-204ENST00000613603 549 ntBASIC15.91■□□□□ 0.14
CHD5Q8TDI0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.91■□□□□ 0.14
CHD5Q8TDI0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CHD5Q8TDI0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHD5Q8TDI0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms