Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 EEF1DP4-201ENST00000446006 880 ntBASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 AC067863.1-201ENST00000494933 530 ntBASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 MIR4453-201ENST00000584019 89 ntBASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 RN7SL828P-201ENST00000607615 303 ntBASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 NORAD-201ENST00000565493 5339 ntBASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 AL136379.1-201ENST00000623471 2642 ntBASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.26■□□□□ 0.03
SRFBP1Q8NEF9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 FO393414.2-201ENST00000405153 598 ntBASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 AC015911.4-201ENST00000588022 1070 ntBASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRFBP1Q8NEF9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 REXO1L1P-202ENST00000608646 1974 ntBASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 SPDYE17-201ENST00000412399 783 ntBASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms