Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 AC004233.3-201ENST00000607794 1269 ntBASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 NFIC-211ENST00000641145 8399 ntBASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ARHGEF39Q8N4T4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 AC007541.1-201ENST00000570282 1469 ntBASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 AP005117.1-202ENST00000581724 1908 ntBASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 AL353779.1-201ENST00000434793 351 ntBASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 TPRX2P-201ENST00000535362 881 ntBASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 TIMM17BP1-201ENST00000545713 516 ntBASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 RARRES2P5-201ENST00000564013 466 ntBASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 CHCHD2P3-201ENST00000603038 451 ntBASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 AL662799.1-202ENST00000614205 422 ntBASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
ARHGEF39Q8N4T4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ARHGEF39Q8N4T4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ARHGEF39Q8N4T4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ARHGEF39Q8N4T4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
ARHGEF39Q8N4T4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.95□□□□□ -0.02
ARHGEF39Q8N4T4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms