Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.33■□□□□ 0.37
VPS52Q8N1B4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.33■□□□□ 0.37
VPS52Q8N1B4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VPS52Q8N1B4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS52Q8N1B4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
VPS52Q8N1B4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
VPS52Q8N1B4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS52Q8N1B4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
VPS52Q8N1B4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 AC055876.2-201ENST00000531834 546 ntBASIC17.32■□□□□ 0.36
VPS52Q8N1B4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 MIR6069-201ENST00000620069 79 ntBASIC17.32■□□□□ 0.36
VPS52Q8N1B4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
VPS52Q8N1B4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 GGT4P-201ENST00000623672 1708 ntBASIC17.31■□□□□ 0.36
VPS52Q8N1B4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 AL139010.1-201ENST00000454878 894 ntBASIC17.31■□□□□ 0.36
VPS52Q8N1B4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 TPRX2P-201ENST00000535362 881 ntBASIC17.31■□□□□ 0.36
VPS52Q8N1B4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 AL109936.8-201ENST00000641772 604 ntBASIC17.31■□□□□ 0.36
VPS52Q8N1B4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms