Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
XRN1Q8IZH2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC21.58■■□□□ 1.04
XRN1Q8IZH2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
XRN1Q8IZH2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.58■■□□□ 1.04
XRN1Q8IZH2 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
XRN1Q8IZH2 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
XRN1Q8IZH2 MSRA-203ENST00000441698 788 ntTSL 2 BASIC21.58■■□□□ 1.04
XRN1Q8IZH2 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
XRN1Q8IZH2 AC103988.2-201ENST00000561804 725 ntBASIC21.58■■□□□ 1.04
XRN1Q8IZH2 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC21.58■■□□□ 1.04
XRN1Q8IZH2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 AL158070.2-201ENST00000623713 1621 ntBASIC21.57■■□□□ 1.04
XRN1Q8IZH2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 OARD1-204ENST00000464633 717 ntTSL 2 BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
XRN1Q8IZH2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
XRN1Q8IZH2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 PDIA3P2-201ENST00000428073 158 ntBASIC21.55■■□□□ 1.04
XRN1Q8IZH2 AL596276.2-201ENST00000447525 331 ntBASIC21.55■■□□□ 1.04
XRN1Q8IZH2 AC008267.1-201ENST00000474858 1069 ntBASIC21.55■■□□□ 1.04
XRN1Q8IZH2 MARK2P5-201ENST00000507649 634 ntBASIC21.55■■□□□ 1.04
XRN1Q8IZH2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 MBP-227ENST00000526111 581 ntTSL 4 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 RN7SL555P-201ENST00000584742 339 ntBASIC21.55■■□□□ 1.04
XRN1Q8IZH2 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC21.55■■□□□ 1.04
XRN1Q8IZH2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 AL645937.2-201ENST00000396808 931 ntBASIC21.55■■□□□ 1.04
XRN1Q8IZH2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 AC069218.1-201ENST00000435269 762 ntBASIC21.55■■□□□ 1.04
XRN1Q8IZH2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 CSH2-206ENST00000560142 749 ntTSL 5 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 SYT17-208ENST00000568433 812 ntTSL 3 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC21.55■■□□□ 1.04
XRN1Q8IZH2 AL645728.2-202ENST00000641679 227 ntBASIC21.55■■□□□ 1.04
XRN1Q8IZH2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC21.54■■□□□ 1.04
XRN1Q8IZH2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms