Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM48Q8IWZ4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM48Q8IWZ4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM48Q8IWZ4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 AC132872.4-202ENST00000622924 2756 ntBASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 TSSK5P-201ENST00000423978 907 ntBASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 FAM207CP-201ENST00000443486 507 ntBASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 AC245100.5-201ENST00000452108 331 ntBASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM48Q8IWZ4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 AC002472.2-201ENST00000442739 958 ntBASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 AC009118.2-201ENST00000613275 655 ntBASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 MIR6069-201ENST00000620069 79 ntBASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 KRT8P12-202ENST00000472924 1397 ntBASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM48Q8IWZ4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms