Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 AL139099.5-201ENST00000635274 300 ntBASIC16.93■□□□□ 0.3
RNF135Q8IUD6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 AL662844.4-201ENST00000606367 2838 ntBASIC16.93■□□□□ 0.3
RNF135Q8IUD6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 FLJ16779-201ENST00000612722 7638 ntBASIC16.93■□□□□ 0.3
RNF135Q8IUD6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 AC099336.1-201ENST00000417053 1171 ntBASIC16.92■□□□□ 0.3
RNF135Q8IUD6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 RNA5SP412-201ENST00000516234 123 ntBASIC16.92■□□□□ 0.3
RNF135Q8IUD6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 AP002490.2-201ENST00000524791 560 ntBASIC16.92■□□□□ 0.3
RNF135Q8IUD6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 AC233724.13-201ENST00000598383 410 ntBASIC16.92■□□□□ 0.3
RNF135Q8IUD6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.92■□□□□ 0.3
RNF135Q8IUD6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 PCDH8P1-201ENST00000428983 2773 ntBASIC16.92■□□□□ 0.3
RNF135Q8IUD6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF135Q8IUD6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 KRT8P12-202ENST00000472924 1397 ntBASIC16.91■□□□□ 0.3
RNF135Q8IUD6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 CDC14C-201ENST00000428251 1719 ntBASIC16.91■□□□□ 0.3
RNF135Q8IUD6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 AL512652.2-201ENST00000625156 1716 ntBASIC16.91■□□□□ 0.3
RNF135Q8IUD6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms