Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 UBALD1-205ENST00000590891 2641 ntBASIC19.68■□□□□ 0.74
COL23A1Q86Y22 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 ACTG1P2-201ENST00000415776 1125 ntBASIC19.67■□□□□ 0.74
COL23A1Q86Y22 ACTG1P11-201ENST00000425411 1125 ntBASIC19.67■□□□□ 0.74
COL23A1Q86Y22 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 AC091544.8-201ENST00000619490 361 ntBASIC19.67■□□□□ 0.74
COL23A1Q86Y22 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL23A1Q86Y22 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 AL008707.1-201ENST00000422498 534 ntBASIC19.66■□□□□ 0.74
COL23A1Q86Y22 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 AC114501.1-201ENST00000445949 172 ntBASIC19.66■□□□□ 0.74
COL23A1Q86Y22 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 AC005915.1-201ENST00000624912 2018 ntBASIC19.66■□□□□ 0.74
COL23A1Q86Y22 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL23A1Q86Y22 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 AC018892.3-201ENST00000623986 2499 ntBASIC19.65■□□□□ 0.74
COL23A1Q86Y22 AC020916.1-201ENST00000587762 1774 ntBASIC19.65■□□□□ 0.74
COL23A1Q86Y22 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 AC114812.1-204ENST00000449669 728 ntBASIC19.65■□□□□ 0.74
COL23A1Q86Y22 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 PPY2P-201ENST00000582808 702 ntBASIC19.65■□□□□ 0.74
COL23A1Q86Y22 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL23A1Q86Y22 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL23A1Q86Y22 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
COL23A1Q86Y22 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL23A1Q86Y22 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms