Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD1LQ86WJ1 C18orf15-201ENST00000623680 2534 ntBASIC19.68■□□□□ 0.74
CHD1LQ86WJ1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD1LQ86WJ1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD1LQ86WJ1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD1LQ86WJ1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD1LQ86WJ1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD1LQ86WJ1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 AL353705.2-201ENST00000428243 662 ntBASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 SPDYE14P-201ENST00000442619 822 ntBASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 AP000344.2-201ENST00000512987 629 ntBASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD1LQ86WJ1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 AC006058.4-201ENST00000624016 1670 ntBASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 TNRC18P2-201ENST00000417666 2714 ntBASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 BX842568.4-201ENST00000421222 227 ntBASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 RBPMS2P1-201ENST00000437762 623 ntBASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHD1LQ86WJ1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms