Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 PPT1-215ENST00000641471 2368 ntBASIC14.45□□□□□ -0.1
ATG4DQ86TL0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 SPDYE17-201ENST00000412399 783 ntBASIC14.45□□□□□ -0.1
ATG4DQ86TL0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 DUX4L27-201ENST00000554796 1261 ntBASIC14.45□□□□□ -0.1
ATG4DQ86TL0 HNRNPUP1-201ENST00000554987 333 ntBASIC14.45□□□□□ -0.1
ATG4DQ86TL0 AC025678.2-201ENST00000562061 970 ntBASIC14.45□□□□□ -0.1
ATG4DQ86TL0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 AC005498.2-205ENST00000593218 784 ntBASIC14.45□□□□□ -0.1
ATG4DQ86TL0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 AL133215.2-201ENST00000609242 977 ntBASIC14.45□□□□□ -0.1
ATG4DQ86TL0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 AL035456.1-201ENST00000456064 1369 ntBASIC14.45□□□□□ -0.1
ATG4DQ86TL0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.45□□□□□ -0.1
ATG4DQ86TL0 AC073347.1-201ENST00000421633 2643 ntBASIC14.45□□□□□ -0.1
ATG4DQ86TL0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 AC136621.1-201ENST00000624017 2304 ntBASIC14.44□□□□□ -0.1
ATG4DQ86TL0 TMBIM7P-203ENST00000641617 1718 ntBASIC14.44□□□□□ -0.1
ATG4DQ86TL0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 MIR770-201ENST00000390219 98 ntBASIC14.44□□□□□ -0.1
ATG4DQ86TL0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 AZGP1P1-201ENST00000411909 902 ntBASIC14.44□□□□□ -0.1
ATG4DQ86TL0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 AL512356.2-201ENST00000546955 174 ntBASIC14.44□□□□□ -0.1
ATG4DQ86TL0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 AL390955.2-201ENST00000603032 514 ntBASIC14.44□□□□□ -0.1
ATG4DQ86TL0 AC097359.3-201ENST00000603982 1210 ntBASIC14.44□□□□□ -0.1
ATG4DQ86TL0 RN7SL828P-201ENST00000607615 303 ntBASIC14.44□□□□□ -0.1
ATG4DQ86TL0 MIR6080-201ENST00000617359 66 ntBASIC14.44□□□□□ -0.1
ATG4DQ86TL0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATG4DQ86TL0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms