Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 AP006288.1-201ENST00000446065 395 ntBASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 RARRES2P9-201ENST00000565168 469 ntBASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 AC005237.2-201ENST00000434368 219 ntBASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 ALG1L8P-201ENST00000533887 760 ntBASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 AL136982.4-201ENST00000437689 1740 ntBASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NHLRC1Q6VVB1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 BNIP3P1-202ENST00000550043 1585 ntBASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 AC211486.1-202ENST00000416371 468 ntBASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 AC254562.1-201ENST00000417586 456 ntBASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 AC211476.1-201ENST00000503899 468 ntBASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 RNA5SP410-201ENST00000516285 106 ntBASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms