Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNKSR3Q6P9H4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 AC015818.8-201ENST00000587907 1519 ntBASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 RPSAP36-202ENST00000494591 1261 ntBASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 AC104982.3-201ENST00000581995 514 ntBASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.93■□□□□ 0.3
CNKSR3Q6P9H4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 ACTG1P17-201ENST00000558391 1119 ntBASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 RN7SL190P-201ENST00000582519 257 ntBASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 AC020914.3-201ENST00000594712 304 ntBASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 AC106820.2-201ENST00000563775 3264 ntBASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNKSR3Q6P9H4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms