Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LYSMD4Q5XG99 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 AC006001.1-201ENST00000325130 474 ntBASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 BTBD6P1-201ENST00000412176 1267 ntBASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 SLC25A24P2-201ENST00000415059 510 ntBASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 AC097359.3-201ENST00000603982 1210 ntBASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD4Q5XG99 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 CALR4P-201ENST00000431943 946 ntBASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 AC078819.1-201ENST00000547454 765 ntBASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 AC012085.1-201ENST00000548270 765 ntBASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 RHOQP1-201ENST00000555758 579 ntBASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 AP005019.2-201ENST00000615104 511 ntBASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 AP001094.4-201ENST00000579008 2176 ntBASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD4Q5XG99 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
LYSMD4Q5XG99 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD4Q5XG99 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
LYSMD4Q5XG99 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
LYSMD4Q5XG99 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD4Q5XG99 AHCYP2-201ENST00000430630 1300 ntBASIC15.48■□□□□ 0.07
LYSMD4Q5XG99 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD4Q5XG99 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.48■□□□□ 0.07
LYSMD4Q5XG99 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD4Q5XG99 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms