Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 NFIC-211ENST00000641145 8399 ntBASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.33■□□□□ 0.04
PRAMEF9Q5VWM5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 AL607033.1-201ENST00000623900 1599 ntBASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 AC136604.1-201ENST00000418535 575 ntBASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 TSEN15P1-201ENST00000423257 515 ntBASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 MTND6P24-201ENST00000440466 518 ntBASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 AP001160.2-201ENST00000596071 487 ntBASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 KRT8P12-202ENST00000472924 1397 ntBASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF9Q5VWM5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 AL080243.2-201ENST00000418783 582 ntBASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 AL079307.3-201ENST00000556114 283 ntBASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 Z92544.3-201ENST00000624747 417 ntBASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF9Q5VWM5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms