Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN1BQ07699 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.3□□□□□ -0.12
SCN1BQ07699 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.3□□□□□ -0.12
SCN1BQ07699 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.3□□□□□ -0.12
SCN1BQ07699 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN1BQ07699 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.3□□□□□ -0.12
SCN1BQ07699 MTDHP4-201ENST00000600287 670 ntBASIC14.3□□□□□ -0.12
SCN1BQ07699 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN1BQ07699 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.3□□□□□ -0.12
SCN1BQ07699 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SCN1BQ07699 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.3□□□□□ -0.12
SCN1BQ07699 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.3□□□□□ -0.12
SCN1BQ07699 AL031731.1-201ENST00000642131 2094 ntBASIC14.3□□□□□ -0.12
SCN1BQ07699 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.3□□□□□ -0.12
SCN1BQ07699 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCN1BQ07699 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN1BQ07699 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN1BQ07699 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.3□□□□□ -0.12
SCN1BQ07699 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SCN1BQ07699 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.3□□□□□ -0.12
SCN1BQ07699 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.3□□□□□ -0.12
SCN1BQ07699 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SCN1BQ07699 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
SCN1BQ07699 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN1BQ07699 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SCN1BQ07699 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.29□□□□□ -0.12
SCN1BQ07699 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.29□□□□□ -0.12
SCN1BQ07699 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.29□□□□□ -0.12
SCN1BQ07699 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.29□□□□□ -0.12
SCN1BQ07699 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SCN1BQ07699 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN1BQ07699 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN1BQ07699 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN1BQ07699 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.29□□□□□ -0.12
SCN1BQ07699 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SCN1BQ07699 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN1BQ07699 AC139887.3-201ENST00000568585 713 ntBASIC14.29□□□□□ -0.12
SCN1BQ07699 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN1BQ07699 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.29□□□□□ -0.12
SCN1BQ07699 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 AL355877.3-201ENST00000622820 899 ntBASIC14.29□□□□□ -0.12
SCN1BQ07699 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.29□□□□□ -0.12
SCN1BQ07699 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN1BQ07699 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SCN1BQ07699 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.29□□□□□ -0.12
SCN1BQ07699 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN1BQ07699 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.29□□□□□ -0.12
SCN1BQ07699 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCN1BQ07699 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SCN1BQ07699 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.28□□□□□ -0.12
SCN1BQ07699 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.28□□□□□ -0.12
SCN1BQ07699 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.28□□□□□ -0.12
SCN1BQ07699 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.28□□□□□ -0.12
SCN1BQ07699 AP002414.1-201ENST00000391405 1147 ntBASIC14.28□□□□□ -0.12
SCN1BQ07699 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 TSPY19P-201ENST00000418461 509 ntBASIC14.28□□□□□ -0.12
SCN1BQ07699 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 TSPY18P-201ENST00000441642 509 ntBASIC14.28□□□□□ -0.12
SCN1BQ07699 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 SCARNA2-201ENST00000458748 420 ntBASIC14.28□□□□□ -0.12
SCN1BQ07699 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.28□□□□□ -0.12
SCN1BQ07699 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms