Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 AL158070.2-201ENST00000623713 1621 ntBASIC19.42■□□□□ 0.7
SCN7AQ01118 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.42■□□□□ 0.7
SCN7AQ01118 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN7AQ01118 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN7AQ01118 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN7AQ01118 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN7AQ01118 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN7AQ01118 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN7AQ01118 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN7AQ01118 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SCN7AQ01118 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN7AQ01118 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN7AQ01118 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN7AQ01118 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SCN7AQ01118 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.41■□□□□ 0.7
SCN7AQ01118 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN7AQ01118 AKR7A2P1-201ENST00000460134 915 ntBASIC19.41■□□□□ 0.7
SCN7AQ01118 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN7AQ01118 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN7AQ01118 AC044849.1-201ENST00000519737 1188 ntBASIC19.41■□□□□ 0.7
SCN7AQ01118 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.41■□□□□ 0.7
SCN7AQ01118 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN7AQ01118 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN7AQ01118 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.41■□□□□ 0.7
SCN7AQ01118 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.41■□□□□ 0.7
SCN7AQ01118 AC015967.2-201ENST00000624092 234 ntBASIC19.41■□□□□ 0.7
SCN7AQ01118 AC006435.4-201ENST00000625037 234 ntBASIC19.41■□□□□ 0.7
SCN7AQ01118 AL356737.1-201ENST00000634391 234 ntBASIC19.41■□□□□ 0.7
SCN7AQ01118 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN7AQ01118 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
SCN7AQ01118 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SCN7AQ01118 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN7AQ01118 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SCN7AQ01118 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.4■□□□□ 0.7
SCN7AQ01118 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.4■□□□□ 0.7
SCN7AQ01118 FAM8A4P-201ENST00000435433 1213 ntBASIC19.4■□□□□ 0.7
SCN7AQ01118 HIST2H2BB-201ENST00000449108 381 ntBASIC19.4■□□□□ 0.7
SCN7AQ01118 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SCN7AQ01118 SERPINA13P-202ENST00000478994 924 ntBASIC19.4■□□□□ 0.7
SCN7AQ01118 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.4■□□□□ 0.7
SCN7AQ01118 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.4■□□□□ 0.7
SCN7AQ01118 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.4■□□□□ 0.7
SCN7AQ01118 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SCN7AQ01118 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SCN7AQ01118 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SCN7AQ01118 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.4■□□□□ 0.7
SCN7AQ01118 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 GHSR-202ENST00000427970 912 ntBASIC19.4■□□□□ 0.7
SCN7AQ01118 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.4■□□□□ 0.7
SCN7AQ01118 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN7AQ01118 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.4■□□□□ 0.7
SCN7AQ01118 AC013355.1-201ENST00000562625 723 ntBASIC19.4■□□□□ 0.7
SCN7AQ01118 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.4■□□□□ 0.7
SCN7AQ01118 AC104982.3-201ENST00000581995 514 ntBASIC19.4■□□□□ 0.7
SCN7AQ01118 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SCN7AQ01118 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCN7AQ01118 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SCN7AQ01118 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SCN7AQ01118 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCN7AQ01118 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN7AQ01118 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN7AQ01118 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN7AQ01118 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCN7AQ01118 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN7AQ01118 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCN7AQ01118 KRT8P19-201ENST00000551916 1455 ntBASIC19.39■□□□□ 0.69
SCN7AQ01118 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SCN7AQ01118 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN7AQ01118 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN7AQ01118 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCN7AQ01118 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.39■□□□□ 0.69
SCN7AQ01118 EIF4HP1-201ENST00000453115 687 ntBASIC19.39■□□□□ 0.69
SCN7AQ01118 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN7AQ01118 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.39■□□□□ 0.69
SCN7AQ01118 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN7AQ01118 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.39■□□□□ 0.69
SCN7AQ01118 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SCN7AQ01118 ZACNP1-201ENST00000612259 710 ntBASIC19.39■□□□□ 0.69
SCN7AQ01118 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN7AQ01118 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCN7AQ01118 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SCN7AQ01118 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SCN7AQ01118 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms