Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 COX11-210ENST00000639671 696 ntBASIC18.59■□□□□ 0.57
IRX3P78415 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX3P78415 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IRX3P78415 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.59■□□□□ 0.57
IRX3P78415 GGT3P-204ENST00000453783 1664 ntBASIC18.59■□□□□ 0.57
IRX3P78415 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.59■□□□□ 0.57
IRX3P78415 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX3P78415 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.59■□□□□ 0.57
IRX3P78415 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.59■□□□□ 0.57
IRX3P78415 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX3P78415 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX3P78415 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.59■□□□□ 0.57
IRX3P78415 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.59■□□□□ 0.57
IRX3P78415 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX3P78415 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
IRX3P78415 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
IRX3P78415 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.58■□□□□ 0.57
IRX3P78415 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.58■□□□□ 0.57
IRX3P78415 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.58■□□□□ 0.57
IRX3P78415 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
IRX3P78415 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
IRX3P78415 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
IRX3P78415 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
IRX3P78415 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
IRX3P78415 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.58■□□□□ 0.56
IRX3P78415 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
IRX3P78415 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
IRX3P78415 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IRX3P78415 BOLA2P3-201ENST00000404566 256 ntBASIC18.58■□□□□ 0.56
IRX3P78415 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IRX3P78415 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.58■□□□□ 0.56
IRX3P78415 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.58■□□□□ 0.56
IRX3P78415 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
IRX3P78415 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.58■□□□□ 0.56
IRX3P78415 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IRX3P78415 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
IRX3P78415 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.58■□□□□ 0.56
IRX3P78415 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.58■□□□□ 0.56
IRX3P78415 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
IRX3P78415 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.58■□□□□ 0.56
IRX3P78415 AC010319.3-201ENST00000597028 470 ntBASIC18.58■□□□□ 0.56
IRX3P78415 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
IRX3P78415 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IRX3P78415 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
IRX3P78415 UBALD1-205ENST00000590891 2641 ntBASIC18.58■□□□□ 0.56
IRX3P78415 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.58■□□□□ 0.56
IRX3P78415 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
IRX3P78415 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
IRX3P78415 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
IRX3P78415 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
IRX3P78415 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.58■□□□□ 0.56
IRX3P78415 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.58■□□□□ 0.56
IRX3P78415 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IRX3P78415 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
IRX3P78415 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.57■□□□□ 0.56
IRX3P78415 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
IRX3P78415 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.57■□□□□ 0.56
IRX3P78415 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.57■□□□□ 0.56
IRX3P78415 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
IRX3P78415 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.57■□□□□ 0.56
IRX3P78415 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 KRT43P-201ENST00000434019 910 ntBASIC18.57■□□□□ 0.56
IRX3P78415 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.57■□□□□ 0.56
IRX3P78415 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.57■□□□□ 0.56
IRX3P78415 AC119751.2-201ENST00000504529 210 ntBASIC18.57■□□□□ 0.56
IRX3P78415 AC092658.1-201ENST00000505836 891 ntBASIC18.57■□□□□ 0.56
IRX3P78415 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.57■□□□□ 0.56
IRX3P78415 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.57■□□□□ 0.56
IRX3P78415 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
IRX3P78415 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.57■□□□□ 0.56
IRX3P78415 AC036164.1-201ENST00000570544 333 ntBASIC18.57■□□□□ 0.56
IRX3P78415 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.57■□□□□ 0.56
IRX3P78415 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
IRX3P78415 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.57■□□□□ 0.56
IRX3P78415 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.57■□□□□ 0.56
IRX3P78415 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
IRX3P78415 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.57■□□□□ 0.56
IRX3P78415 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.57■□□□□ 0.56
IRX3P78415 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX3P78415 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
IRX3P78415 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms