Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.69■□□□□ 0.26
IRX4P78413 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.69■□□□□ 0.26
IRX4P78413 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.69■□□□□ 0.26
IRX4P78413 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
IRX4P78413 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.69■□□□□ 0.26
IRX4P78413 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.69■□□□□ 0.26
IRX4P78413 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.69■□□□□ 0.26
IRX4P78413 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.69■□□□□ 0.26
IRX4P78413 AC006277.1-201ENST00000624348 1610 ntBASIC16.69■□□□□ 0.26
IRX4P78413 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.69■□□□□ 0.26
IRX4P78413 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.68■□□□□ 0.26
IRX4P78413 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.68■□□□□ 0.26
IRX4P78413 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.68■□□□□ 0.26
IRX4P78413 AC010491.1-201ENST00000563101 2797 ntBASIC16.68■□□□□ 0.26
IRX4P78413 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.68■□□□□ 0.26
IRX4P78413 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.68■□□□□ 0.26
IRX4P78413 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 PIN1P1-201ENST00000412108 996 ntBASIC16.68■□□□□ 0.26
IRX4P78413 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.68■□□□□ 0.26
IRX4P78413 AC241585.1-201ENST00000433527 519 ntBASIC16.68■□□□□ 0.26
IRX4P78413 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 AC004890.2-204ENST00000481968 304 ntBASIC16.68■□□□□ 0.26
IRX4P78413 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.68■□□□□ 0.26
IRX4P78413 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.68■□□□□ 0.26
IRX4P78413 SPDYE22P-201ENST00000582158 798 ntBASIC16.68■□□□□ 0.26
IRX4P78413 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
IRX4P78413 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.68■□□□□ 0.26
IRX4P78413 AC012569.1-201ENST00000591191 1524 ntBASIC16.68■□□□□ 0.26
IRX4P78413 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.68■□□□□ 0.26
IRX4P78413 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.68■□□□□ 0.26
IRX4P78413 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.68■□□□□ 0.26
IRX4P78413 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
IRX4P78413 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.68■□□□□ 0.26
IRX4P78413 MTHFR-217ENST00000641820 1569 ntBASIC16.68■□□□□ 0.26
IRX4P78413 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IRX4P78413 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.67■□□□□ 0.26
IRX4P78413 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.67■□□□□ 0.26
IRX4P78413 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
IRX4P78413 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 HLA-V-201ENST00000429037 534 ntBASIC16.67■□□□□ 0.26
IRX4P78413 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.67■□□□□ 0.26
IRX4P78413 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
IRX4P78413 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.67■□□□□ 0.26
IRX4P78413 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.67■□□□□ 0.26
IRX4P78413 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.67■□□□□ 0.26
IRX4P78413 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 MIR4453-201ENST00000584019 89 ntBASIC16.67■□□□□ 0.26
IRX4P78413 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.67■□□□□ 0.26
IRX4P78413 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.67■□□□□ 0.26
IRX4P78413 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.67■□□□□ 0.26
IRX4P78413 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.67■□□□□ 0.26
IRX4P78413 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.67■□□□□ 0.26
IRX4P78413 AL596087.1-201ENST00000400979 1969 ntBASIC16.67■□□□□ 0.26
IRX4P78413 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
IRX4P78413 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
IRX4P78413 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
IRX4P78413 AC007326.2-201ENST00000624224 7579 ntBASIC16.67■□□□□ 0.26
IRX4P78413 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX4P78413 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms