Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SNRPFP62306 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.26■□□□□ 0.35
SNRPFP62306 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.26■□□□□ 0.35
SNRPFP62306 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
SNRPFP62306 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.25■□□□□ 0.35
SNRPFP62306 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.25■□□□□ 0.35
SNRPFP62306 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 AC022532.1-201ENST00000624563 1728 ntBASIC17.25■□□□□ 0.35
SNRPFP62306 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.25■□□□□ 0.35
SNRPFP62306 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SNRPFP62306 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.25■□□□□ 0.35
SNRPFP62306 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.25■□□□□ 0.35
SNRPFP62306 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
SNRPFP62306 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.25■□□□□ 0.35
SNRPFP62306 AC114501.2-201ENST00000439631 535 ntBASIC17.25■□□□□ 0.35
SNRPFP62306 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SNRPFP62306 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.25■□□□□ 0.35
SNRPFP62306 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.25■□□□□ 0.35
SNRPFP62306 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.25■□□□□ 0.35
SNRPFP62306 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.25■□□□□ 0.35
SNRPFP62306 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.25■□□□□ 0.35
SNRPFP62306 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.25■□□□□ 0.35
SNRPFP62306 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.25■□□□□ 0.35
SNRPFP62306 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.25■□□□□ 0.35
SNRPFP62306 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SNRPFP62306 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.25■□□□□ 0.35
SNRPFP62306 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SNRPFP62306 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.25■□□□□ 0.35
SNRPFP62306 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNRPFP62306 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SNRPFP62306 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SNRPFP62306 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.24■□□□□ 0.35
SNRPFP62306 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.24■□□□□ 0.35
SNRPFP62306 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SNRPFP62306 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 AC015922.1-201ENST00000421102 1152 ntBASIC17.24■□□□□ 0.35
SNRPFP62306 BASP1P1-201ENST00000430708 665 ntBASIC17.24■□□□□ 0.35
SNRPFP62306 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.24■□□□□ 0.35
SNRPFP62306 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 AC004890.2-204ENST00000481968 304 ntBASIC17.24■□□□□ 0.35
SNRPFP62306 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.24■□□□□ 0.35
SNRPFP62306 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.24■□□□□ 0.35
SNRPFP62306 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.24■□□□□ 0.35
SNRPFP62306 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.24■□□□□ 0.35
SNRPFP62306 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNRPFP62306 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SNRPFP62306 PRAL-201ENST00000624952 3286 ntBASIC17.23■□□□□ 0.35
SNRPFP62306 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SNRPFP62306 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 AC090616.6-203ENST00000579186 1945 ntBASIC17.23■□□□□ 0.35
SNRPFP62306 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SNRPFP62306 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.23■□□□□ 0.35
SNRPFP62306 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.23■□□□□ 0.35
SNRPFP62306 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SNRPFP62306 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms