Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
AP1S1P61966 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.02■□□□□ 0.16
AP1S1P61966 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.16
AP1S1P61966 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.02■□□□□ 0.16
AP1S1P61966 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.02■□□□□ 0.16
AP1S1P61966 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.02■□□□□ 0.16
AP1S1P61966 FAM207CP-201ENST00000443486 507 ntBASIC16.02■□□□□ 0.16
AP1S1P61966 UGT1A2P-201ENST00000454886 866 ntBASIC16.02■□□□□ 0.16
AP1S1P61966 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.02■□□□□ 0.16
AP1S1P61966 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.02■□□□□ 0.16
AP1S1P61966 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.02■□□□□ 0.16
AP1S1P61966 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.02■□□□□ 0.16
AP1S1P61966 MIR4313-201ENST00000580760 101 ntBASIC16.02■□□□□ 0.16
AP1S1P61966 AC009118.2-201ENST00000613275 655 ntBASIC16.02■□□□□ 0.16
AP1S1P61966 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.02■□□□□ 0.16
AP1S1P61966 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.02■□□□□ 0.16
AP1S1P61966 AC004840.1-201ENST00000636359 365 ntBASIC16.02■□□□□ 0.16
AP1S1P61966 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
AP1S1P61966 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S1P61966 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S1P61966 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
AP1S1P61966 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.02■□□□□ 0.15
AP1S1P61966 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.02■□□□□ 0.15
AP1S1P61966 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.02■□□□□ 0.15
AP1S1P61966 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S1P61966 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
AP1S1P61966 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S1P61966 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S1P61966 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
AP1S1P61966 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.02■□□□□ 0.15
AP1S1P61966 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
AP1S1P61966 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
AP1S1P61966 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.01■□□□□ 0.15
AP1S1P61966 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.01■□□□□ 0.15
AP1S1P61966 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.01■□□□□ 0.15
AP1S1P61966 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.01■□□□□ 0.15
AP1S1P61966 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
AP1S1P61966 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.01■□□□□ 0.15
AP1S1P61966 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.01■□□□□ 0.15
AP1S1P61966 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.01■□□□□ 0.15
AP1S1P61966 AC004461.2-201ENST00000629517 803 ntBASIC16.01■□□□□ 0.15
AP1S1P61966 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
AP1S1P61966 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
AP1S1P61966 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S1P61966 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
AP1S1P61966 AL607033.1-201ENST00000623900 1599 ntBASIC16■□□□□ 0.15
AP1S1P61966 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
AP1S1P61966 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16■□□□□ 0.15
AP1S1P61966 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16■□□□□ 0.15
AP1S1P61966 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 AP005117.1-202ENST00000581724 1908 ntBASIC16■□□□□ 0.15
AP1S1P61966 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16■□□□□ 0.15
AP1S1P61966 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16■□□□□ 0.15
AP1S1P61966 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
AP1S1P61966 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16■□□□□ 0.15
AP1S1P61966 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
AP1S1P61966 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16■□□□□ 0.15
AP1S1P61966 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 AC074338.1-201ENST00000416825 156 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms