Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.06□□□□□ -0.16
SEC61A1P61619 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 AL359258.3-201ENST00000622910 2331 ntBASIC14.06□□□□□ -0.16
SEC61A1P61619 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SEC61A1P61619 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.05□□□□□ -0.16
SEC61A1P61619 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.05□□□□□ -0.16
SEC61A1P61619 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SEC61A1P61619 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.05□□□□□ -0.16
SEC61A1P61619 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SEC61A1P61619 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.05□□□□□ -0.16
SEC61A1P61619 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.05□□□□□ -0.16
SEC61A1P61619 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.05□□□□□ -0.16
SEC61A1P61619 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.05□□□□□ -0.16
SEC61A1P61619 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 CEND1P1-201ENST00000451006 455 ntBASIC14.05□□□□□ -0.16
SEC61A1P61619 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.05□□□□□ -0.16
SEC61A1P61619 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.05□□□□□ -0.16
SEC61A1P61619 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.05□□□□□ -0.16
SEC61A1P61619 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.05□□□□□ -0.16
SEC61A1P61619 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
SEC61A1P61619 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.05□□□□□ -0.16
SEC61A1P61619 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.05□□□□□ -0.16
SEC61A1P61619 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.05□□□□□ -0.16
SEC61A1P61619 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.05□□□□□ -0.16
SEC61A1P61619 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.05□□□□□ -0.16
SEC61A1P61619 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 ELL2P1-201ENST00000413990 1906 ntBASIC14.05□□□□□ -0.16
SEC61A1P61619 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.05□□□□□ -0.16
SEC61A1P61619 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SEC61A1P61619 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.05□□□□□ -0.16
SEC61A1P61619 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.05□□□□□ -0.16
SEC61A1P61619 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61A1P61619 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 AC006277.1-201ENST00000624348 1610 ntBASIC14.04□□□□□ -0.16
SEC61A1P61619 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SEC61A1P61619 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SEC61A1P61619 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SEC61A1P61619 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SEC61A1P61619 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.04□□□□□ -0.16
SEC61A1P61619 MKNK2P1-201ENST00000437526 628 ntBASIC14.04□□□□□ -0.16
SEC61A1P61619 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.04□□□□□ -0.16
SEC61A1P61619 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.04□□□□□ -0.16
SEC61A1P61619 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.04□□□□□ -0.16
SEC61A1P61619 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SEC61A1P61619 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.04□□□□□ -0.16
SEC61A1P61619 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.04□□□□□ -0.16
SEC61A1P61619 AP002472.1-201ENST00000577490 586 ntBASIC14.04□□□□□ -0.16
SEC61A1P61619 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.04□□□□□ -0.16
SEC61A1P61619 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SEC61A1P61619 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.04□□□□□ -0.16
SEC61A1P61619 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.04□□□□□ -0.16
SEC61A1P61619 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.04□□□□□ -0.16
SEC61A1P61619 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.04□□□□□ -0.16
SEC61A1P61619 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61A1P61619 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
SEC61A1P61619 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms