Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 HIST3H2BA-201ENST00000436555 524 ntBASIC16.1■□□□□ 0.17
WNT3AP56704 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.1■□□□□ 0.17
WNT3AP56704 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.1■□□□□ 0.17
WNT3AP56704 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.1■□□□□ 0.17
WNT3AP56704 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.1■□□□□ 0.17
WNT3AP56704 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.1■□□□□ 0.17
WNT3AP56704 AC006538.3-201ENST00000612495 578 ntBASIC16.1■□□□□ 0.17
WNT3AP56704 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.1■□□□□ 0.17
WNT3AP56704 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.1■□□□□ 0.17
WNT3AP56704 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 TUBB3P1-201ENST00000405796 1332 ntBASIC16.1■□□□□ 0.17
WNT3AP56704 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
WNT3AP56704 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.1■□□□□ 0.17
WNT3AP56704 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
WNT3AP56704 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.1■□□□□ 0.17
WNT3AP56704 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.1■□□□□ 0.17
WNT3AP56704 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
WNT3AP56704 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.09■□□□□ 0.17
WNT3AP56704 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.09■□□□□ 0.17
WNT3AP56704 AC092127.1-201ENST00000567093 3455 ntBASIC16.09■□□□□ 0.17
WNT3AP56704 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
WNT3AP56704 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
WNT3AP56704 CETN4P-206ENST00000642099 2168 ntBASIC16.09■□□□□ 0.17
WNT3AP56704 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.09■□□□□ 0.17
WNT3AP56704 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 FO393414.2-201ENST00000405153 598 ntBASIC16.09■□□□□ 0.17
WNT3AP56704 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.09■□□□□ 0.17
WNT3AP56704 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
WNT3AP56704 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 HNRNPUP1-201ENST00000554987 333 ntBASIC16.09■□□□□ 0.17
WNT3AP56704 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.09■□□□□ 0.17
WNT3AP56704 AC097359.3-201ENST00000603982 1210 ntBASIC16.09■□□□□ 0.17
WNT3AP56704 KRT18P28-201ENST00000453838 1332 ntBASIC16.09■□□□□ 0.17
WNT3AP56704 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
WNT3AP56704 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.09■□□□□ 0.17
WNT3AP56704 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.09■□□□□ 0.17
WNT3AP56704 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
WNT3AP56704 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
WNT3AP56704 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.08■□□□□ 0.17
WNT3AP56704 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.08■□□□□ 0.17
WNT3AP56704 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
WNT3AP56704 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
WNT3AP56704 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
WNT3AP56704 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
WNT3AP56704 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
WNT3AP56704 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
WNT3AP56704 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.08■□□□□ 0.16
WNT3AP56704 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
WNT3AP56704 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 AL080243.2-201ENST00000418783 582 ntBASIC16.08■□□□□ 0.16
WNT3AP56704 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.08■□□□□ 0.16
WNT3AP56704 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
WNT3AP56704 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.08■□□□□ 0.16
WNT3AP56704 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.08■□□□□ 0.16
WNT3AP56704 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.08■□□□□ 0.16
WNT3AP56704 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.08■□□□□ 0.16
WNT3AP56704 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.08■□□□□ 0.16
WNT3AP56704 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.08■□□□□ 0.16
WNT3AP56704 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.08■□□□□ 0.16
WNT3AP56704 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.08■□□□□ 0.16
WNT3AP56704 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.08■□□□□ 0.16
WNT3AP56704 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
WNT3AP56704 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
WNT3AP56704 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms