Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.64■□□□□ 0.09
CDH13P55290 MED15P5-201ENST00000423150 992 ntBASIC15.64■□□□□ 0.09
CDH13P55290 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.64■□□□□ 0.09
CDH13P55290 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH13P55290 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH13P55290 AC106730.1-201ENST00000566722 1090 ntBASIC15.64■□□□□ 0.09
CDH13P55290 AC061975.2-201ENST00000581722 295 ntBASIC15.64■□□□□ 0.09
CDH13P55290 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH13P55290 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH13P55290 AL691432.1-201ENST00000596308 1422 ntBASIC15.64■□□□□ 0.09
CDH13P55290 AC027601.4-201ENST00000611259 610 ntBASIC15.64■□□□□ 0.09
CDH13P55290 AC120114.3-201ENST00000611923 658 ntBASIC15.64■□□□□ 0.09
CDH13P55290 BX640515.1-201ENST00000617215 977 ntBASIC15.64■□□□□ 0.09
CDH13P55290 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH13P55290 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH13P55290 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH13P55290 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH13P55290 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH13P55290 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CDH13P55290 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
CDH13P55290 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.63■□□□□ 0.09
CDH13P55290 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH13P55290 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CDH13P55290 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH13P55290 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 BNIP3P1-202ENST00000550043 1585 ntBASIC15.63■□□□□ 0.09
CDH13P55290 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CDH13P55290 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CDH13P55290 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDH13P55290 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.63■□□□□ 0.09
CDH13P55290 AL671277.1-201ENST00000429656 993 ntBASIC15.63■□□□□ 0.09
CDH13P55290 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.63■□□□□ 0.09
CDH13P55290 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
CDH13P55290 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
CDH13P55290 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 AC105233.2-201ENST00000523697 349 ntBASIC15.63■□□□□ 0.09
CDH13P55290 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 AF228730.5-201ENST00000530288 346 ntBASIC15.63■□□□□ 0.09
CDH13P55290 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDH13P55290 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH13P55290 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDH13P55290 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
CDH13P55290 AL135744.1-201ENST00000565098 629 ntBASIC15.63■□□□□ 0.09
CDH13P55290 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.63■□□□□ 0.09
CDH13P55290 AC027307.2-201ENST00000591252 911 ntBASIC15.63■□□□□ 0.09
CDH13P55290 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 AC091812.2-201ENST00000619081 385 ntBASIC15.63■□□□□ 0.09
CDH13P55290 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH13P55290 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDH13P55290 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH13P55290 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH13P55290 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH13P55290 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH13P55290 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH13P55290 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH13P55290 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH13P55290 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDH13P55290 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDH13P55290 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CDH13P55290 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH13P55290 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH13P55290 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CDH13P55290 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH13P55290 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms