Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CACNA2D1P54289 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 SPTLC1P1-201ENST00000447199 261 ntBASIC16.91■□□□□ 0.3
CACNA2D1P54289 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 AC243562.2-201ENST00000561247 970 ntBASIC16.91■□□□□ 0.3
CACNA2D1P54289 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.91■□□□□ 0.3
CACNA2D1P54289 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.91■□□□□ 0.3
CACNA2D1P54289 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CACNA2D1P54289 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 AC018892.3-201ENST00000623986 2499 ntBASIC16.9■□□□□ 0.3
CACNA2D1P54289 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 KRT8P37-201ENST00000451609 1420 ntBASIC16.9■□□□□ 0.3
CACNA2D1P54289 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.9■□□□□ 0.3
CACNA2D1P54289 GNAQP1-201ENST00000444815 1067 ntBASIC16.9■□□□□ 0.3
CACNA2D1P54289 SERBP1P3-201ENST00000459980 809 ntBASIC16.9■□□□□ 0.3
CACNA2D1P54289 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 AC135586.1-201ENST00000539323 574 ntBASIC16.9■□□□□ 0.3
CACNA2D1P54289 AC104794.3-201ENST00000566840 1248 ntBASIC16.9■□□□□ 0.3
CACNA2D1P54289 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.9■□□□□ 0.3
CACNA2D1P54289 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.9■□□□□ 0.3
CACNA2D1P54289 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.9■□□□□ 0.3
CACNA2D1P54289 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.9■□□□□ 0.3
CACNA2D1P54289 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms