Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC140912.1-201ENST00000577171 1054 ntBASIC16.38■□□□□ 0.21
ATXN3P54252 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.38■□□□□ 0.21
ATXN3P54252 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.38■□□□□ 0.21
ATXN3P54252 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.38■□□□□ 0.21
ATXN3P54252 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ATXN3P54252 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ATXN3P54252 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.38■□□□□ 0.21
ATXN3P54252 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ATXN3P54252 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATXN3P54252 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.37■□□□□ 0.21
ATXN3P54252 HLA-A-202ENST00000376806 1854 ntBASIC16.37■□□□□ 0.21
ATXN3P54252 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.37■□□□□ 0.21
ATXN3P54252 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 CETN4P-206ENST00000642099 2168 ntBASIC16.37■□□□□ 0.21
ATXN3P54252 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.37■□□□□ 0.21
ATXN3P54252 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ATXN3P54252 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.37■□□□□ 0.21
ATXN3P54252 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ATXN3P54252 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.37■□□□□ 0.21
ATXN3P54252 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ATXN3P54252 HLA-H-201ENST00000383620 1096 ntBASIC16.37■□□□□ 0.21
ATXN3P54252 AC142381.1-201ENST00000426099 345 ntBASIC16.37■□□□□ 0.21
ATXN3P54252 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.37■□□□□ 0.21
ATXN3P54252 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.37■□□□□ 0.21
ATXN3P54252 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.37■□□□□ 0.21
ATXN3P54252 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.37■□□□□ 0.21
ATXN3P54252 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.37■□□□□ 0.21
ATXN3P54252 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.37■□□□□ 0.21
ATXN3P54252 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
ATXN3P54252 AC005052.1-201ENST00000625181 2492 ntBASIC16.37■□□□□ 0.21
ATXN3P54252 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATXN3P54252 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ATXN3P54252 SLC22A20-204ENST00000530038 1673 ntBASIC16.37■□□□□ 0.21
ATXN3P54252 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ATXN3P54252 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.36■□□□□ 0.21
ATXN3P54252 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ATXN3P54252 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ATXN3P54252 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ATXN3P54252 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.36■□□□□ 0.21
ATXN3P54252 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.36■□□□□ 0.21
ATXN3P54252 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.36■□□□□ 0.21
ATXN3P54252 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.36■□□□□ 0.21
ATXN3P54252 AL589739.1-201ENST00000607720 493 ntBASIC16.36■□□□□ 0.21
ATXN3P54252 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATXN3P54252 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.36■□□□□ 0.21
ATXN3P54252 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.36■□□□□ 0.21
ATXN3P54252 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ATXN3P54252 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATXN3P54252 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATXN3P54252 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.35■□□□□ 0.21
ATXN3P54252 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATXN3P54252 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATXN3P54252 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ATXN3P54252 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATXN3P54252 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATXN3P54252 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ATXN3P54252 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATXN3P54252 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.35■□□□□ 0.21
ATXN3P54252 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ATXN3P54252 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
ATXN3P54252 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ATXN3P54252 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms