Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SMSP52788 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMSP52788 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMSP52788 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
SMSP52788 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMSP52788 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.03■□□□□ -0
SMSP52788 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMSP52788 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMSP52788 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SMSP52788 AC236430.1-201ENST00000402231 743 ntBASIC15.03■□□□□ -0
SMSP52788 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.03■□□□□ -0
SMSP52788 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.03■□□□□ -0
SMSP52788 FAM207CP-201ENST00000443486 507 ntBASIC15.03■□□□□ -0
SMSP52788 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.03■□□□□ -0
SMSP52788 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMSP52788 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SMSP52788 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
SMSP52788 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMSP52788 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SMSP52788 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMSP52788 AC022532.1-201ENST00000624563 1728 ntBASIC15.03■□□□□ -0
SMSP52788 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SMSP52788 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.03■□□□□ -0
SMSP52788 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.03■□□□□ -0
SMSP52788 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SMSP52788 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.02■□□□□ -0
SMSP52788 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
SMSP52788 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.02■□□□□ -0
SMSP52788 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.02■□□□□ -0
SMSP52788 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.02■□□□□ -0
SMSP52788 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 MIR648-201ENST00000385046 94 ntBASIC15.02■□□□□ -0
SMSP52788 FAM58DP-201ENST00000428076 619 ntBASIC15.02■□□□□ -0
SMSP52788 AC002472.2-201ENST00000442739 958 ntBASIC15.02■□□□□ -0
SMSP52788 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.02■□□□□ -0
SMSP52788 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.02■□□□□ -0
SMSP52788 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMSP52788 AC027307.3-201ENST00000594262 1100 ntBASIC15.02■□□□□ -0
SMSP52788 CYP2A7P1-201ENST00000595391 815 ntBASIC15.02■□□□□ -0
SMSP52788 AC012645.4-201ENST00000610691 1061 ntBASIC15.02■□□□□ -0
SMSP52788 AC020765.3-201ENST00000613051 740 ntBASIC15.02■□□□□ -0
SMSP52788 AP001350.2-201ENST00000625104 1094 ntBASIC15.02■□□□□ -0
SMSP52788 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SMSP52788 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.02□□□□□ -0.01
SMSP52788 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.02□□□□□ -0.01
SMSP52788 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SMSP52788 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.02□□□□□ -0.01
SMSP52788 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMSP52788 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMSP52788 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMSP52788 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SMSP52788 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMSP52788 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.01□□□□□ -0.01
SMSP52788 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMSP52788 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMSP52788 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SMSP52788 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMSP52788 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMSP52788 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SMSP52788 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SMSP52788 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMSP52788 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.01□□□□□ -0.01
SMSP52788 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SMSP52788 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SMSP52788 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMSP52788 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMSP52788 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMSP52788 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.01□□□□□ -0.01
SMSP52788 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.01□□□□□ -0.01
SMSP52788 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.01□□□□□ -0.01
SMSP52788 SPCS2P4-201ENST00000436160 681 ntBASIC15.01□□□□□ -0.01
SMSP52788 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.01□□□□□ -0.01
SMSP52788 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.01□□□□□ -0.01
SMSP52788 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.01□□□□□ -0.01
SMSP52788 AC107918.2-201ENST00000530817 355 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms