Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC15.71■□□□□ 0.11
GTF2A1P52655 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
GTF2A1P52655 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.71■□□□□ 0.11
GTF2A1P52655 KRT18P29-201ENST00000397031 1267 ntBASIC15.71■□□□□ 0.11
GTF2A1P52655 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.71■□□□□ 0.11
GTF2A1P52655 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.71■□□□□ 0.11
GTF2A1P52655 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.71■□□□□ 0.11
GTF2A1P52655 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
GTF2A1P52655 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
GTF2A1P52655 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GTF2A1P52655 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.71■□□□□ 0.1
GTF2A1P52655 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GTF2A1P52655 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC15.71■□□□□ 0.1
GTF2A1P52655 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GTF2A1P52655 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GTF2A1P52655 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GTF2A1P52655 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC15.7■□□□□ 0.1
GTF2A1P52655 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.7■□□□□ 0.1
GTF2A1P52655 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GTF2A1P52655 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
GTF2A1P52655 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GTF2A1P52655 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.7■□□□□ 0.1
GTF2A1P52655 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 SEC1P-202ENST00000473944 940 ntBASIC15.7■□□□□ 0.1
GTF2A1P52655 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GTF2A1P52655 BX088651.1-201ENST00000540551 451 ntBASIC15.7■□□□□ 0.1
GTF2A1P52655 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GTF2A1P52655 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.7■□□□□ 0.1
GTF2A1P52655 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.7■□□□□ 0.1
GTF2A1P52655 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.7■□□□□ 0.1
GTF2A1P52655 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
GTF2A1P52655 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
GTF2A1P52655 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GTF2A1P52655 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.7■□□□□ 0.1
GTF2A1P52655 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.7■□□□□ 0.1
GTF2A1P52655 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 AC069224.1-201ENST00000566372 1715 ntBASIC15.7■□□□□ 0.1
GTF2A1P52655 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.7■□□□□ 0.1
GTF2A1P52655 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GTF2A1P52655 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GTF2A1P52655 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.7■□□□□ 0.1
GTF2A1P52655 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.7■□□□□ 0.1
GTF2A1P52655 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GTF2A1P52655 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
GTF2A1P52655 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
GTF2A1P52655 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.69■□□□□ 0.1
GTF2A1P52655 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
GTF2A1P52655 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
GTF2A1P52655 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
GTF2A1P52655 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 AC007663.1-201ENST00000438948 1240 ntBASIC15.69■□□□□ 0.1
GTF2A1P52655 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.69■□□□□ 0.1
GTF2A1P52655 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.69■□□□□ 0.1
GTF2A1P52655 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms