Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP13P45452 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MMP13P45452 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP13P45452 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MMP13P45452 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
MMP13P45452 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP13P45452 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP13P45452 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP13P45452 AC254562.1-201ENST00000417586 456 ntBASIC16.62■□□□□ 0.25
MMP13P45452 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 AP006288.1-201ENST00000446065 395 ntBASIC16.62■□□□□ 0.25
MMP13P45452 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP13P45452 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.62■□□□□ 0.25
MMP13P45452 AC004835.2-201ENST00000603762 682 ntBASIC16.62■□□□□ 0.25
MMP13P45452 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.62■□□□□ 0.25
MMP13P45452 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP13P45452 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.62■□□□□ 0.25
MMP13P45452 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MMP13P45452 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MMP13P45452 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MMP13P45452 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP13P45452 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP13P45452 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MMP13P45452 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP13P45452 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP13P45452 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.61■□□□□ 0.25
MMP13P45452 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP13P45452 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
MMP13P45452 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MMP13P45452 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.61■□□□□ 0.25
MMP13P45452 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP13P45452 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MMP13P45452 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.61■□□□□ 0.25
MMP13P45452 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.61■□□□□ 0.25
MMP13P45452 SLC25A39P2-201ENST00000537614 270 ntBASIC16.61■□□□□ 0.25
MMP13P45452 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.61■□□□□ 0.25
MMP13P45452 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP13P45452 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.61■□□□□ 0.25
MMP13P45452 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP13P45452 AL365330.1-201ENST00000607459 531 ntBASIC16.61■□□□□ 0.25
MMP13P45452 AC084121.4-201ENST00000641598 221 ntBASIC16.61■□□□□ 0.25
MMP13P45452 AF228730.8-201ENST00000642140 221 ntBASIC16.61■□□□□ 0.25
MMP13P45452 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
MMP13P45452 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
MMP13P45452 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MMP13P45452 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MMP13P45452 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP13P45452 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.61■□□□□ 0.25
MMP13P45452 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 AC023908.3-201ENST00000564211 3047 ntBASIC16.61■□□□□ 0.25
MMP13P45452 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
MMP13P45452 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MMP13P45452 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP13P45452 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP13P45452 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
MMP13P45452 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP13P45452 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.6■□□□□ 0.25
MMP13P45452 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms