Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.65□□□□□ -0.06
RFC3P40938 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RFC3P40938 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.65□□□□□ -0.06
RFC3P40938 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.65□□□□□ -0.06
RFC3P40938 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.65□□□□□ -0.06
RFC3P40938 TSPY26P-202ENST00000565928 3884 ntBASIC14.65□□□□□ -0.06
RFC3P40938 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.65□□□□□ -0.06
RFC3P40938 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 AC092364.2-201ENST00000596710 2692 ntBASIC14.65□□□□□ -0.06
RFC3P40938 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
RFC3P40938 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.65□□□□□ -0.06
RFC3P40938 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RFC3P40938 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFC3P40938 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.07
RFC3P40938 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.07
RFC3P40938 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.64□□□□□ -0.07
RFC3P40938 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RFC3P40938 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
RFC3P40938 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
RFC3P40938 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RFC3P40938 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.64□□□□□ -0.07
RFC3P40938 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.64□□□□□ -0.07
RFC3P40938 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.64□□□□□ -0.07
RFC3P40938 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.64□□□□□ -0.07
RFC3P40938 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFC3P40938 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RFC3P40938 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.64□□□□□ -0.07
RFC3P40938 POU5F1P6-201ENST00000466990 990 ntBASIC14.64□□□□□ -0.07
RFC3P40938 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.64□□□□□ -0.07
RFC3P40938 DOC2GP-202ENST00000514950 1163 ntBASIC14.64□□□□□ -0.07
RFC3P40938 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.64□□□□□ -0.07
RFC3P40938 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
RFC3P40938 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.64□□□□□ -0.07
RFC3P40938 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RFC3P40938 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.64□□□□□ -0.07
RFC3P40938 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
RFC3P40938 PCDHA14-201ENST00000506751 2298 ntBASIC14.64□□□□□ -0.07
RFC3P40938 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RFC3P40938 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.64□□□□□ -0.07
RFC3P40938 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
RFC3P40938 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RFC3P40938 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFC3P40938 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RFC3P40938 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFC3P40938 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RFC3P40938 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
RFC3P40938 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.63□□□□□ -0.07
RFC3P40938 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.63□□□□□ -0.07
RFC3P40938 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFC3P40938 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RFC3P40938 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFC3P40938 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.63□□□□□ -0.07
RFC3P40938 SPDYE17-201ENST00000412399 783 ntBASIC14.63□□□□□ -0.07
RFC3P40938 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.63□□□□□ -0.07
RFC3P40938 AL589987.1-201ENST00000453380 819 ntBASIC14.63□□□□□ -0.07
RFC3P40938 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RFC3P40938 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.63□□□□□ -0.07
RFC3P40938 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.63□□□□□ -0.07
RFC3P40938 AL596325.1-201ENST00000563991 1082 ntBASIC14.63□□□□□ -0.07
RFC3P40938 MIR6069-201ENST00000620069 79 ntBASIC14.63□□□□□ -0.07
RFC3P40938 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 AC004461.2-201ENST00000629517 803 ntBASIC14.63□□□□□ -0.07
RFC3P40938 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.63□□□□□ -0.07
RFC3P40938 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.63□□□□□ -0.07
RFC3P40938 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.63□□□□□ -0.07
RFC3P40938 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFC3P40938 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms