Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.97■□□□□ 0.79
COL15A1P39059 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL15A1P39059 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL15A1P39059 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL15A1P39059 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.97■□□□□ 0.79
COL15A1P39059 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.97■□□□□ 0.79
COL15A1P39059 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL15A1P39059 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.97■□□□□ 0.79
COL15A1P39059 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL15A1P39059 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL15A1P39059 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL15A1P39059 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.97■□□□□ 0.79
COL15A1P39059 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.97■□□□□ 0.79
COL15A1P39059 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.97■□□□□ 0.79
COL15A1P39059 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.97■□□□□ 0.79
COL15A1P39059 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL15A1P39059 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.97■□□□□ 0.79
COL15A1P39059 AL118508.1-201ENST00000613502 2345 ntBASIC19.97■□□□□ 0.79
COL15A1P39059 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL15A1P39059 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL15A1P39059 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
COL15A1P39059 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL15A1P39059 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL15A1P39059 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL15A1P39059 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.97■□□□□ 0.79
COL15A1P39059 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL15A1P39059 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.97■□□□□ 0.79
COL15A1P39059 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.97■□□□□ 0.79
COL15A1P39059 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL15A1P39059 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 GPAA1P2-201ENST00000417923 928 ntBASIC19.96■□□□□ 0.79
COL15A1P39059 CNN2P8-201ENST00000421872 913 ntBASIC19.96■□□□□ 0.79
COL15A1P39059 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.96■□□□□ 0.79
COL15A1P39059 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
COL15A1P39059 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.96■□□□□ 0.79
COL15A1P39059 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.96■□□□□ 0.79
COL15A1P39059 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.96■□□□□ 0.79
COL15A1P39059 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.96■□□□□ 0.79
COL15A1P39059 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.96■□□□□ 0.79
COL15A1P39059 AC015910.1-201ENST00000579400 975 ntBASIC19.96■□□□□ 0.79
COL15A1P39059 MIR3615-201ENST00000581999 87 ntBASIC19.96■□□□□ 0.79
COL15A1P39059 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
COL15A1P39059 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.96■□□□□ 0.79
COL15A1P39059 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
COL15A1P39059 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
COL15A1P39059 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL15A1P39059 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL15A1P39059 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.96■□□□□ 0.79
COL15A1P39059 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
COL15A1P39059 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.96■□□□□ 0.79
COL15A1P39059 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL15A1P39059 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.96■□□□□ 0.79
COL15A1P39059 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.79
COL15A1P39059 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
COL15A1P39059 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.95■□□□□ 0.79
COL15A1P39059 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.95■□□□□ 0.79
COL15A1P39059 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.95■□□□□ 0.79
COL15A1P39059 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
COL15A1P39059 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.95■□□□□ 0.79
COL15A1P39059 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.95■□□□□ 0.79
COL15A1P39059 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.95■□□□□ 0.79
COL15A1P39059 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COL15A1P39059 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.95■□□□□ 0.78
COL15A1P39059 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.95■□□□□ 0.78
COL15A1P39059 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.95■□□□□ 0.78
COL15A1P39059 AC006449.5-201ENST00000610658 2098 ntBASIC19.95■□□□□ 0.78
COL15A1P39059 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL15A1P39059 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
COL15A1P39059 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL15A1P39059 PCDHB19P-201ENST00000570871 2371 ntBASIC19.95■□□□□ 0.78
COL15A1P39059 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.95■□□□□ 0.78
COL15A1P39059 AC069224.1-201ENST00000566372 1715 ntBASIC19.95■□□□□ 0.78
COL15A1P39059 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.95■□□□□ 0.78
COL15A1P39059 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.95■□□□□ 0.78
COL15A1P39059 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL15A1P39059 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.95■□□□□ 0.78
COL15A1P39059 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.95■□□□□ 0.78
COL15A1P39059 AL662844.4-201ENST00000606367 2838 ntBASIC19.95■□□□□ 0.78
COL15A1P39059 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
COL15A1P39059 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL15A1P39059 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL15A1P39059 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL15A1P39059 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.95■□□□□ 0.78
COL15A1P39059 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.95■□□□□ 0.78
COL15A1P39059 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL15A1P39059 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.95■□□□□ 0.78
COL15A1P39059 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.95■□□□□ 0.78
COL15A1P39059 AC124067.4-201ENST00000519691 2379 ntBASIC19.95■□□□□ 0.78
COL15A1P39059 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms