Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC21.56■■□□□ 1.04
ATF3P18847 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ATF3P18847 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC21.56■■□□□ 1.04
ATF3P18847 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ATF3P18847 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
ATF3P18847 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ATF3P18847 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ATF3P18847 UFM1-202ENST00000379649 846 ntTSL 4 BASIC21.56■■□□□ 1.04
ATF3P18847 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC21.56■■□□□ 1.04
ATF3P18847 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 LBH-202ENST00000401506 485 ntTSL 3 BASIC21.56■■□□□ 1.04
ATF3P18847 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC21.56■■□□□ 1.04
ATF3P18847 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC21.56■■□□□ 1.04
ATF3P18847 AC114501.1-201ENST00000445949 172 ntBASIC21.56■■□□□ 1.04
ATF3P18847 AL596276.2-201ENST00000447525 331 ntBASIC21.56■■□□□ 1.04
ATF3P18847 CFL1-214ENST00000534769 758 ntTSL 2 BASIC21.56■■□□□ 1.04
ATF3P18847 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC21.56■■□□□ 1.04
ATF3P18847 RN7SL555P-201ENST00000584742 339 ntBASIC21.56■■□□□ 1.04
ATF3P18847 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ATF3P18847 AL645939.5-201ENST00000606834 243 ntBASIC21.56■■□□□ 1.04
ATF3P18847 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC21.56■■□□□ 1.04
ATF3P18847 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21.56■■□□□ 1.04
ATF3P18847 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ATF3P18847 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ATF3P18847 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 POLL-217ENST00000628479 1953 ntTSL 5 BASIC21.56■■□□□ 1.04
ATF3P18847 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATF3P18847 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
ATF3P18847 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATF3P18847 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.55■■□□□ 1.04
ATF3P18847 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATF3P18847 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATF3P18847 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.55■■□□□ 1.04
ATF3P18847 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATF3P18847 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
ATF3P18847 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATF3P18847 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ATF3P18847 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC21.55■■□□□ 1.04
ATF3P18847 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATF3P18847 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC21.55■■□□□ 1.04
ATF3P18847 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC21.55■■□□□ 1.04
ATF3P18847 AC005740.2-201ENST00000511085 419 ntBASIC21.55■■□□□ 1.04
ATF3P18847 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC21.55■■□□□ 1.04
ATF3P18847 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
ATF3P18847 PPY2P-201ENST00000582808 702 ntBASIC21.55■■□□□ 1.04
ATF3P18847 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATF3P18847 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC21.55■■□□□ 1.04
ATF3P18847 AC100757.4-201ENST00000626934 759 ntBASIC21.55■■□□□ 1.04
ATF3P18847 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ATF3P18847 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC21.55■■□□□ 1.04
ATF3P18847 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.55■■□□□ 1.04
ATF3P18847 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATF3P18847 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.55■■□□□ 1.04
ATF3P18847 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATF3P18847 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATF3P18847 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC21.55■■□□□ 1.04
ATF3P18847 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.55■■□□□ 1.04
ATF3P18847 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC21.55■■□□□ 1.04
ATF3P18847 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ATF3P18847 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ATF3P18847 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ATF3P18847 FAM8A4P-201ENST00000435433 1213 ntBASIC21.54■■□□□ 1.04
ATF3P18847 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC21.54■■□□□ 1.04
ATF3P18847 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC21.54■■□□□ 1.04
ATF3P18847 AC005730.2-201ENST00000564549 1184 ntBASIC21.54■■□□□ 1.04
ATF3P18847 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC21.54■■□□□ 1.04
ATF3P18847 AP000346.4-201ENST00000614827 381 ntBASIC21.54■■□□□ 1.04
ATF3P18847 ENPP7P14-201ENST00000621765 1040 ntBASIC21.54■■□□□ 1.04
ATF3P18847 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ATF3P18847 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ATF3P18847 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ATF3P18847 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC21.54■■□□□ 1.04
ATF3P18847 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATF3P18847 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms