Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN1P18031 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN1P18031 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 PIN1P1-201ENST00000412108 996 ntBASIC16.85■□□□□ 0.29
PTPN1P18031 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN1P18031 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN1P18031 AC092337.1-201ENST00000568699 1129 ntBASIC16.85■□□□□ 0.29
PTPN1P18031 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN1P18031 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN1P18031 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN1P18031 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 AF228730.6-201ENST00000641497 218 ntBASIC16.85■□□□□ 0.29
PTPN1P18031 AC084121.3-201ENST00000641716 218 ntBASIC16.85■□□□□ 0.29
PTPN1P18031 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN1P18031 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN1P18031 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 AL596257.1-201ENST00000641463 2694 ntBASIC16.85■□□□□ 0.29
PTPN1P18031 AC026691.1-201ENST00000602502 2017 ntBASIC16.85■□□□□ 0.29
PTPN1P18031 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 AC010491.1-201ENST00000563101 2797 ntBASIC16.85■□□□□ 0.29
PTPN1P18031 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN1P18031 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN1P18031 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN1P18031 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN1P18031 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PTPN1P18031 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN1P18031 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PTPN1P18031 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN1P18031 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN1P18031 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN1P18031 RPL13P2-201ENST00000440687 659 ntBASIC16.84■□□□□ 0.29
PTPN1P18031 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN1P18031 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN1P18031 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.84■□□□□ 0.29
PTPN1P18031 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN1P18031 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 AC007541.1-201ENST00000570282 1469 ntBASIC16.84■□□□□ 0.29
PTPN1P18031 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 AL607033.1-201ENST00000623900 1599 ntBASIC16.84■□□□□ 0.29
PTPN1P18031 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN1P18031 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PTPN1P18031 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PTPN1P18031 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PTPN1P18031 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN1P18031 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTPN1P18031 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.83■□□□□ 0.29
PTPN1P18031 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PTPN1P18031 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms