Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.62■□□□□ 0.25
TCF4P15884 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TCF4P15884 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.62■□□□□ 0.25
TCF4P15884 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TCF4P15884 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TCF4P15884 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.62■□□□□ 0.25
TCF4P15884 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.62■□□□□ 0.25
TCF4P15884 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TCF4P15884 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.62■□□□□ 0.25
TCF4P15884 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.62■□□□□ 0.25
TCF4P15884 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.62■□□□□ 0.25
TCF4P15884 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.62■□□□□ 0.25
TCF4P15884 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.62■□□□□ 0.25
TCF4P15884 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.62■□□□□ 0.25
TCF4P15884 HNRNPUP1-201ENST00000554987 333 ntBASIC16.62■□□□□ 0.25
TCF4P15884 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.62■□□□□ 0.25
TCF4P15884 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.62■□□□□ 0.25
TCF4P15884 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.62■□□□□ 0.25
TCF4P15884 AC097359.3-201ENST00000603982 1210 ntBASIC16.62■□□□□ 0.25
TCF4P15884 AC003101.2-201ENST00000612557 442 ntBASIC16.62■□□□□ 0.25
TCF4P15884 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.62■□□□□ 0.25
TCF4P15884 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.62■□□□□ 0.25
TCF4P15884 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCF4P15884 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TCF4P15884 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TCF4P15884 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.61■□□□□ 0.25
TCF4P15884 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TCF4P15884 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.61■□□□□ 0.25
TCF4P15884 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 HIST3H2BA-201ENST00000436555 524 ntBASIC16.61■□□□□ 0.25
TCF4P15884 AP006288.1-201ENST00000446065 395 ntBASIC16.61■□□□□ 0.25
TCF4P15884 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.61■□□□□ 0.25
TCF4P15884 MIR4453-201ENST00000584019 89 ntBASIC16.61■□□□□ 0.25
TCF4P15884 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.61■□□□□ 0.25
TCF4P15884 AL450472.2-201ENST00000603663 1156 ntBASIC16.61■□□□□ 0.25
TCF4P15884 AL596442.2-201ENST00000610240 980 ntBASIC16.61■□□□□ 0.25
TCF4P15884 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TCF4P15884 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TCF4P15884 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 NFIC-211ENST00000641145 8399 ntBASIC16.61■□□□□ 0.25
TCF4P15884 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TCF4P15884 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.61■□□□□ 0.25
TCF4P15884 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCF4P15884 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.6■□□□□ 0.25
TCF4P15884 AC138035.3-201ENST00000622706 2791 ntBASIC16.6■□□□□ 0.25
TCF4P15884 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCF4P15884 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.6■□□□□ 0.25
TCF4P15884 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCF4P15884 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCF4P15884 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.6■□□□□ 0.25
TCF4P15884 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.6■□□□□ 0.25
TCF4P15884 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCF4P15884 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCF4P15884 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCF4P15884 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.6■□□□□ 0.25
TCF4P15884 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TCF4P15884 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCF4P15884 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TCF4P15884 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.6■□□□□ 0.25
TCF4P15884 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.6■□□□□ 0.25
TCF4P15884 CNN2P11-201ENST00000429351 262 ntBASIC16.6■□□□□ 0.25
TCF4P15884 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.6■□□□□ 0.25
TCF4P15884 PHKG1P2-201ENST00000457537 863 ntBASIC16.6■□□□□ 0.25
TCF4P15884 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TCF4P15884 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.6■□□□□ 0.25
TCF4P15884 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms