Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
LAMP1P11279 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.13■□□□□ 0.01
LAMP1P11279 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.13■□□□□ 0.01
LAMP1P11279 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 MIR574-201ENST00000385209 96 ntBASIC15.13■□□□□ 0.01
LAMP1P11279 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.13■□□□□ 0.01
LAMP1P11279 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LAMP1P11279 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.13■□□□□ 0.01
LAMP1P11279 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.13■□□□□ 0.01
LAMP1P11279 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LAMP1P11279 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.13■□□□□ 0.01
LAMP1P11279 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.13■□□□□ 0.01
LAMP1P11279 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LAMP1P11279 TIMM8BP1-201ENST00000452384 211 ntBASIC15.13■□□□□ 0.01
LAMP1P11279 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 IGHV3-62-201ENST00000520057 340 ntBASIC15.13■□□□□ 0.01
LAMP1P11279 KRT18P58-201ENST00000527480 1120 ntBASIC15.13■□□□□ 0.01
LAMP1P11279 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.13■□□□□ 0.01
LAMP1P11279 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.13■□□□□ 0.01
LAMP1P11279 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 C20orf181-201ENST00000623918 480 ntBASIC15.13■□□□□ 0.01
LAMP1P11279 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.13■□□□□ 0.01
LAMP1P11279 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LAMP1P11279 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LAMP1P11279 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
LAMP1P11279 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LAMP1P11279 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.12■□□□□ 0.01
LAMP1P11279 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LAMP1P11279 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 TNRC18P2-201ENST00000417666 2714 ntBASIC15.12■□□□□ 0.01
LAMP1P11279 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.12■□□□□ 0.01
LAMP1P11279 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LAMP1P11279 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LAMP1P11279 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.12■□□□□ 0.01
LAMP1P11279 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.12■□□□□ 0.01
LAMP1P11279 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LAMP1P11279 HLA-H-201ENST00000383620 1096 ntBASIC15.12■□□□□ 0.01
LAMP1P11279 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.12■□□□□ 0.01
LAMP1P11279 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 KRT8P23-201ENST00000560090 1207 ntBASIC15.12■□□□□ 0.01
LAMP1P11279 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.12■□□□□ 0.01
LAMP1P11279 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.12■□□□□ 0.01
LAMP1P11279 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.12■□□□□ 0.01
LAMP1P11279 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.12■□□□□ 0.01
LAMP1P11279 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.12■□□□□ 0.01
LAMP1P11279 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LAMP1P11279 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
LAMP1P11279 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.12■□□□□ 0.01
LAMP1P11279 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LAMP1P11279 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.12■□□□□ 0.01
LAMP1P11279 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.12■□□□□ 0.01
LAMP1P11279 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LAMP1P11279 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LAMP1P11279 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LAMP1P11279 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LAMP1P11279 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LAMP1P11279 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LAMP1P11279 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LAMP1P11279 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LAMP1P11279 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LAMP1P11279 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.11■□□□□ 0.01
LAMP1P11279 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.11■□□□□ 0.01
LAMP1P11279 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LAMP1P11279 AC004832.2-201ENST00000426397 482 ntBASIC15.11■□□□□ 0.01
LAMP1P11279 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.11■□□□□ 0.01
LAMP1P11279 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms