Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
RARAP10276 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RARAP10276 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.77■□□□□ 0.27
RARAP10276 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.77■□□□□ 0.27
RARAP10276 AL691432.1-201ENST00000596308 1422 ntBASIC16.77■□□□□ 0.27
RARAP10276 FAM45BP-202ENST00000592932 1624 ntBASIC16.77■□□□□ 0.27
RARAP10276 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RARAP10276 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RARAP10276 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RARAP10276 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RARAP10276 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.77■□□□□ 0.27
RARAP10276 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RARAP10276 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.77■□□□□ 0.27
RARAP10276 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RARAP10276 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RARAP10276 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RARAP10276 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
RARAP10276 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RARAP10276 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.76■□□□□ 0.27
RARAP10276 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RARAP10276 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.76■□□□□ 0.27
RARAP10276 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 HLA-H-201ENST00000383620 1096 ntBASIC16.76■□□□□ 0.27
RARAP10276 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.76■□□□□ 0.27
RARAP10276 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.76■□□□□ 0.27
RARAP10276 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.76■□□□□ 0.27
RARAP10276 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RARAP10276 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.76■□□□□ 0.27
RARAP10276 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.76■□□□□ 0.27
RARAP10276 AC010327.4-202ENST00000591484 748 ntBASIC16.76■□□□□ 0.27
RARAP10276 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.76■□□□□ 0.27
RARAP10276 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.76■□□□□ 0.27
RARAP10276 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RARAP10276 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
RARAP10276 AP3S2-216ENST00000617003 1561 ntBASIC16.76■□□□□ 0.27
RARAP10276 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.76■□□□□ 0.27
RARAP10276 AC105250.1-201ENST00000509378 2057 ntBASIC16.76■□□□□ 0.27
RARAP10276 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.76■□□□□ 0.27
RARAP10276 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RARAP10276 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RARAP10276 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.76■□□□□ 0.27
RARAP10276 AC087481.3-201ENST00000602886 1894 ntBASIC16.76■□□□□ 0.27
RARAP10276 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RARAP10276 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RARAP10276 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.75■□□□□ 0.27
RARAP10276 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RARAP10276 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.75■□□□□ 0.27
RARAP10276 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 AC138035.3-201ENST00000622706 2791 ntBASIC16.75■□□□□ 0.27
RARAP10276 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
RARAP10276 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.75■□□□□ 0.27
RARAP10276 RPSAP43-201ENST00000402237 625 ntBASIC16.75■□□□□ 0.27
RARAP10276 BX842568.4-201ENST00000421222 227 ntBASIC16.75■□□□□ 0.27
RARAP10276 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.75■□□□□ 0.27
RARAP10276 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RARAP10276 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.75■□□□□ 0.27
RARAP10276 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.75■□□□□ 0.27
RARAP10276 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.75■□□□□ 0.27
RARAP10276 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.75■□□□□ 0.27
RARAP10276 AL513210.1-201ENST00000629608 234 ntBASIC16.75■□□□□ 0.27
RARAP10276 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.75■□□□□ 0.27
RARAP10276 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.75■□□□□ 0.27
RARAP10276 AC092127.1-201ENST00000567093 3455 ntBASIC16.75■□□□□ 0.27
RARAP10276 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RARAP10276 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.75■□□□□ 0.27
RARAP10276 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms