Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.44□□□□□ -0.26
CD74P04233 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.44□□□□□ -0.26
CD74P04233 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.44□□□□□ -0.26
CD74P04233 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.44□□□□□ -0.26
CD74P04233 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
CD74P04233 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.44□□□□□ -0.26
CD74P04233 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 AC008667.4-201ENST00000607370 168 ntBASIC13.44□□□□□ -0.26
CD74P04233 NPAP1P7-201ENST00000613027 823 ntBASIC13.44□□□□□ -0.26
CD74P04233 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.44□□□□□ -0.26
CD74P04233 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CD74P04233 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CD74P04233 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 AC007326.2-201ENST00000624224 7579 ntBASIC13.44□□□□□ -0.26
CD74P04233 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CD74P04233 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.44□□□□□ -0.26
CD74P04233 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.44□□□□□ -0.26
CD74P04233 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.44□□□□□ -0.26
CD74P04233 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CD74P04233 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 AL589702.1-201ENST00000641229 1509 ntBASIC13.44□□□□□ -0.26
CD74P04233 AC140479.7-201ENST00000636301 2332 ntBASIC13.44□□□□□ -0.26
CD74P04233 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.44□□□□□ -0.26
CD74P04233 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD74P04233 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.43□□□□□ -0.26
CD74P04233 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.43□□□□□ -0.26
CD74P04233 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CD74P04233 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.43□□□□□ -0.26
CD74P04233 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.43□□□□□ -0.26
CD74P04233 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
CD74P04233 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CD74P04233 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.43□□□□□ -0.26
CD74P04233 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.43□□□□□ -0.26
CD74P04233 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CD74P04233 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CD74P04233 KRT18P27-201ENST00000427733 1299 ntBASIC13.43□□□□□ -0.26
CD74P04233 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.43□□□□□ -0.26
CD74P04233 FGFR3P6-201ENST00000457012 610 ntBASIC13.43□□□□□ -0.26
CD74P04233 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.43□□□□□ -0.26
CD74P04233 AC138894.3-201ENST00000603787 634 ntBASIC13.43□□□□□ -0.26
CD74P04233 AC025062.2-201ENST00000605477 670 ntBASIC13.43□□□□□ -0.26
CD74P04233 ACTL9-202ENST00000612068 1252 ntBASIC13.43□□□□□ -0.26
CD74P04233 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.43□□□□□ -0.26
CD74P04233 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CD74P04233 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CD74P04233 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.43□□□□□ -0.26
CD74P04233 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms